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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
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Posts
Just another microbial ecology and evolution blog
Published:
This is my first blog on my website! I hope to provide helpful analysis and creative solutions to the many problems that I encounter when working on new collections of genomes or applying new tools
portfolio
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publications
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil
Published in The American journal of tropical medicine and hygiene, 2006
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Evidence for late Pleistocene population expansion of the malarial mosquitoes Anopheles arabiensis and Anopheles gambiae in Nigeria
Published in Medical and veterinary entomology, 2007
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Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America
Published in BMC ecology, 2008
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Detection of broadly distributed sodium channel alleles characteristic of insect pyrethroid resistance in West Nile virus vector Culex pipiens complex mosquitoes in the United States
Published in Journal of medical entomology, 2009
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A filtering method to generate high quality short reads using Illumina paired-end technology
Published in PloS one, 2013
A filtering method to generate high quality short reads using Illumina paired-end technology
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Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis
Published in Microbiome, 2013
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A filtering method to generate high quality short reads using Illumina paired-end technology
Published in PloS one, 2013
Download here
Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects
Published in Microbiome, 2014
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Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea Antarctica
Published in Frontiers in microbiology, 2015
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Anvi’o: an advanced analysis and visualization platform for ‘omics data.
Published in PeerJ , 2015
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Anvi’o: an advanced analysis and visualization platform for ‘omics data
Published in PeerJ, 2015
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Comparison of sewage and animal fecal microbiomes by using oligotyping reveals potential human fecal indicators in multiple taxonomic groups
Published in Applied and environmental microbiology, 2015
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Sewage reflects the microbiomes of human populations
Published in MBio, 2015
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Patient-specific Bacteroides genome variants in pouchitis
Published in MBio, 2016
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The toxicogenome of Hyalella azteca: a model for sediment ecotoxicology and evolutionary toxicology
Published in Environmental science & technology, 2018
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Metagenomics coupled with biogeochemical rates measurements provide evidence that nitrate addition stimulates respiration in salt marsh sediments
Published in Limnology and Oceanography, 2020
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Microbial community response to a passive salt marsh restoration
Published in Estuaries and Coasts, 2020
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Sulphide addition favours respiratory ammonification (DNRA) over complete denitrification and alters the active microbial community in salt marsh sediments
Published in Environmental Microbiology, 2020
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talks
Networks and genome resolved metagenomics of a diatom bloom shed light on potential parasites and the importance of biotic interactions
Published:
A microbiome meeting during October in 2022
Microbial Omic’s Tutorial
Published:
teaching
Adding my teaching experience soon
soon come, , 2024
I’ll describe all of my teaching experience and philosophy. # #Heading 1 #======